| structure name | THE CRYSTAL STRUCTURE OF QSRR-DNA COMPLEX (Transcriptional regulator QsrR) |
| reference | Zhang et al. Proc.Natl.Acad.Sci.USA 110 5010 2013 |
| source | Staphylococcus aureus |
| experiment | X-ray (resolution=2.30, R-factor=0.208) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| sequence family | HxlRlike helixturnhelix; |
| multimeric complexes | 4hqe_AB |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | FTPRAL |
Estimated binding specificities ?
| contact |  |
A | 9 81 19 38 10 C | 9 4 19 20 63 G | 11 7 20 19 10 T | 67 4 38 19 13scan! |
Dendrogram of similar interfaces ?
matrix format----FG--TTPTRTAT--LT------------------ L +----4hqe_A +------------1 --------TT--PTTCSTNT------------RT---- L +---3 +----4lln_I ! ! ------NGLTKTPTSTTT------RT------RT---- L +-5 +-----------------7el3_B ! ! ------ET--RGTCTGSTRG------------KT---- L +-6 +---------------------6q2b_B ! ! --------DCSA--TATT------RT------RA---- L +-9 +-----------------------1z9c_A ! ! --------STQTPTPGTTRG--------------HT-- L ! +-------------------------5xxp_A ! ------LTNTHG--RTYTPT------------RT---- L ! +----------6qil_A +-10 +---------2 ----------------NASTRGHT--STLT-------- L ! ! +--4 +----------7cby_C ! ! ! ! ------LTNTHGTA--YTRG------------------ ! ! +-7 +--------------------2efw_A +-11 ! ! ! QA----------------------------------NG ! ! +-8 +-----------------------7k63_U ! ! ! --------ST--PTTCSTQC----RA------------ L +-12 ! +-------------------------1ddn_B ! ! ! ----------------NASTRGHTNTSTLT-------- L ! ! +--------------------------7fj2_B +-13 ! ------------------RC--YG------KT------ ! ! +---------------------------2acj_B +-14 ! ------------KGTA--TA----RG------------ L ! ! +----------------------------1xsd_A +-15 ! --------HT--STATSTRG------------------ L ! ! +----------------------------5lej_A -16 ! --RC---------------------------------- ! +----------------------------6l9z_S ! --------SGRGPT--SGRG------------------ L +----------------------------7bhy_A |
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updated Tue Dec 19 08:56:56 2023