| structure name | THE COMPLEX CRYSTAL STRUCTURE OF THE DNA BINDING DOMAIN OF VIRF-1 FROM THE ONCOGENIC KSHV WITH DNA (K9) |
| reference | Venkatachalam et al. 'Nucleic 41 4295 2013 |
| source | HUMAN HERPESVIRUS 8 |
| experiment | X-ray (resolution=1.48, R-factor=0.198) |
| structural superfamily | "Winged helix" DNA-binding domain; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Dendrogram of similar interfaces ?
matrix formatECKT--RGAT--RGHT----RA-- L +---4mhg_A +-------------------------2 --KT--RG----RGYA-------- L ! ! +-4l18_B --3 +-1 --KT--RG----RGYT-------- L ! +-4bqa_A ! ----NAST--RGHT--STLT--KA L +-----------------------------2c6y_A |
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updated Tue Dec 19 08:56:28 2023