interface graph thumbnail
legend  pdf

structure nameSACUVDE IN COMPLEX WITH 6-4PP-CONTAINING DNA
(UV damage endonuclease)
referenceMeulenbroek et al. 'Nucleic 41 1363 2013
sourceSulfolobus acidocaldarius
experimentX-ray (resolution=2.70, R-factor=0.195)
structural superfamilyXylose isomerase-like;
sequence familyUVendonuclease UvdE;
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureKLSHQYE

Estimated binding specificities ?

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# IC=3.101 IC/col=0.517 n_of_columns=6 specificity:   
A |  16  16   0  24  24   0
C |  13  13  96  24  24   0
G |  54  13   0  24  24  96
T |  13  54   0  24  24   0
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updated Tue Dec 19 08:52:28 2023