| structure name | CPG SPECIFIC METHYLTRANSFERASE IN COMPLEX WITH TARGET DNA (Cytosine-specific methyltransferase) |
| reference | Wojciechowski et al. Proc.Natl.Acad.Sci.USA 110 105 2013 |
| source | Mycoplasma penetrans |
| experiment | X-ray (resolution=2.15, R-factor=0.178) |
| structural superfamily | S-adenosyl-L-methionine-dependent methyltransferases; |
| sequence family | C5 cytosinespecific DNA methylase; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | VQFNSESANR |
Estimated binding specificities ?
| contact |  |
A | 54 0 0 0 54 C | 13 0 0 96 13 G | 13 96 96 0 13 T | 16 0 0 0 16scan! |
Dendrogram of similar interfaces ?
matrix format--VGQG--------------------------------------FGNGSGEGSCAGNGRA-- L +------------4dkj_A +--------1 ----------RTYGRG------------------DT------------KT--RG-------- +--2 +------------7ubu_A ! ! CC----NAVGNG----------------ECNCVC------RCRC----------------RC +--4 +---------------------6kdb_D ! ! ------------------------------------------------------MC------ ! ! +---------------------6x9j_A +-5 +--3 --------VG--PG------------------------------------------------ L ! ! +---------------------6w8b_A +-6 ! ------------------STEALGMAQG---------------------------------- ! ! +---------------------------6ymv_B --7 ! ----------------NA-------------------------------------------- L ! +----------------------------7n8s_A ! ------------------------------------TTQT---------------------- +----------------------------7dwr_B |
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updated Tue Dec 19 08:41:50 2023