interface graph thumbnail
legend  pdf

structure nameSUBSTRATE BOUND NEISSERIA AP ENDONUCLEASE IN ABSENCE OF METAL IONS (CRYSTAL FORM 1)
(PUTATIVE EXODEOXYRIBONUCLEASE)
referenceMacDonald et al. 'Proc. 109 16852 2012
sourceNEISSERIA MENINGITIDIS
experimentX-ray (resolution=2.00, R-factor=0.182)
structural superfamilyDNase I-like;
sequence familyEndonuclease/Exonuclease/phosphatase fa;
multimeric complexes4b5g_BC 4b5m_BC
redundant complexes4b5g_A 4b5h_A 4b5i_A 4b5j_A 4b5m_C
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ----SCNT--NG--NGRG----                       +4b5f_A    
                                             +-1 
  KT------------YCRG----                   +-2 +3g00_B    
                                           ! ! 
  ------------YCRG------       +-----------3 +2voa_B    
                               !           ! 
  KG--RT--NGNC--YTMA----     --5           +-6bow_A    
                               ! 
  --YT----------YCRC----       !     +-------6fk5_A    
                               +-----4 
  ------------------PTHA   L         +-------7n8s_A    
                             

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updated Tue Dec 19 08:37:28 2023