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structure nameCRYSTAL STRUCTURE OF VAPBC2 FROM RICKETTSIA FELIS BOUND TO A DNA FRAGMENT FROM THEIR PROMOTER
(ANTITOXIN OF TOXIN-ANTITOXIN SYSTEM VAPB)
referenceOrtiz-Lombardia et al. 'Nucleic 40 3245 2012
sourceRICKETTSIA FELIS
experimentX-ray (resolution=2.50, R-factor=0.174)
structural superfamilyAbrB/MazE/MraZ-like;
sequence familySpoVT / AbrB like domain;
multimeric complexes3zvk_EFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureFNQSR

Estimated binding specificities ?

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# IC=6.315 IC/col=0.789 n_of_columns=8 specificity:   
A |  90  96   5  79   7  62  24  96
C |   5   0   5   5   5  16  24   0
G |   0   0   5   5   5  13  24   0
T |   1   0  81   7  79   5  24   0
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updated Tue Dec 19 08:34:32 2023