3zpl_EF : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SCO3205, A MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM STREPTOMYCES COELICOLOR, IN COMPLEX WITH DNA
reference	Stevenson et al. 'Nucleic 41 7009 2013
source	STREPTOMYCES COELICOLOR
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	3zpl_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3zpl_E interface=71,72,73,75,76,97, ndeprwltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpseadlpwlr > 3zpl_F interface=66,67,68,70,71,92, wltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpsedlpwlr
interface signature	RSRSHR/RSRSHR

Estimated binding specificities ?

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# IC=11.782 IC/col=0.589 n_of_columns=20

specificity:

A |  80  88  24  24   2   0   0  88  24  24  24  24   4   0  83  88  24  24   2  10
C |   2   2  24  24   2  13   0   4  24  24  24  24   2  96   1   2  24  24   2  12
G |  12   2  24  24   4   0  96   2  24  24  24  24   2   0  12   2  24  24   4   4
T |   2   4  24  24  88  83   0   2  24  24  24  24  88   0   0   4  24  24  88  70

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updated Fri Dec 15 18:19:47 2023