3zpl_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SCO3205, A MARR FAMILY TRANSCRIPTIONAL REGULATOR FROM STREPTOMYCES COELICOLOR, IN COMPLEX WITH DNA
reference	Stevenson et al. 'Nucleic 41 7009 2013
source	STREPTOMYCES COELICOLOR
experiment	X-ray (resolution=2.80, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	3zpl_B
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3zpl_A interface=68,69,70,72,73,94, prwltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpseagadlpwlr > 3zpl_B interface=68,69,70,72,73,94, prwltaeeqlvwrsyieaatlledhldrqlqrdagmphvyygllvklaesprrrlrmtelakyakitRSRlSHavarlekngwvrredcpsdkRgqfailtdegyevlrrtapghvdavrqavfdrltpeqqkslgeimrivaeglqpseagadlpwlr
interface signature	RSRSHR/RSRSHR

Estimated binding specificities ?

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# IC=12.825 IC/col=0.675 n_of_columns=19

specificity:

A |  90  12  24   3   0   0  87  24  24  24  24   3   0  93  87   3  24   3   3
C |   3   9  24   9   9   0   3  24  24  24  24   0  96   0   3  87  24   3   3
G |   0  63  24   3   0  96   3  24  24  24  24   3   0   3   3   0  24   3   9
T |   3  12  24  81  87   0   3  24  24  24  24  90   0   0   3   6  24  87  81

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updated Fri Dec 15 18:19:34 2023