interface graph thumbnail
legend  pdf

3D-footprint cannot reliably estimate the specificity of histones, as they display few contacts over long stretches of DNA.


Dendrogram of similar interfaces ?

matrix format
structure nameCRYSTAL STRUCTURE OF HUMAN NUCLEOSOME CORE PARTICLE LACKING H4 N- TERMINAL REGION
(HISTONE H4)
referenceKurumizaka et al. 'FEBS 3 363 2013
sourceHOMO SAPIENS
experimentX-ray (resolution=3.00, R-factor=?)
structural superfamilyHistone-fold;
sequence familyCore histone H2A/H2B/H3/H4;
multimeric complexes3w99_ABCDEFGH
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
  
  ----RA                                             +6t7a_C    
                                      +--------------1 
  ----RT               +--------------2              +7lyb_G    
                       !              ! 
  ----RT             +-3              +--------------1u35_G    
                     ! ! 
  ----RT           +-4 +-----------------------------7lya_E    
                   ! ! 
  RAET--         +-5 +-----------------------------4ne1_p    
                 ! ! 
  ----RT       +-6 +-----------------------------7zs9_e    
               ! ! 
  ----RT     --7 +-----------------------------7wlr_E    
               ! 
  --ITRA       +-----------------------------7k78_E    
             

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updated Tue Dec 19 08:23:34 2023