interface graph thumbnail
legend  pdf

structure nameANTIBODY 64M-5 FAB IN COMPLEX WITH A DOUBLE-STRANDED DNA (6-4) PHOTOPRODUCT
(ANTI-6-4 PHOTOPRODUCT ANTIBODY 64M-5 FAB LIGHT CHAIN)
referenceYokoyama et al.
sourceMUS MUSCULUS
experimentX-ray (resolution=2.50, R-factor=0.247)
structural superfamilyImmunoglobulin;
sequence familyImmunoglobulin C1set domain; Immunoglobulin Vset domain; Immunoglobulin domain;
multimeric complexes3vw3_HL
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ----VANA--YAYA--TA----SA--------HA--                                  +3vw3_L    
                                                       +----------------2 
  ------------YTYTNTEC--------HTYT----               +-3                +2fr4_L    
                                                     ! ! 
  --------SCYA------------------------       +-------4 +-----------------2fr4_B    
                                             !       ! 
  ----------------------------------RT     --5       +-------------------4oi8_B    
                                             ! 
  NAVT----------------LTFAVATA--------   L   !                           +1ytb_A    
                                             +---------------------------1 
  NTVA----------------LTFAVATT--------   L                               +1rm1_A    
                                           

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updated Tue Dec 19 08:22:18 2023