structure nameSTRUCTURE OF U2AF65 VARIANT WITH BRU5C6 DNA
(SPLICING FACTOR U2AF 65 KDA SUBUNIT)
referenceKielkopf et al. 'Nucleic 41 3859 2013
sourceHOMO SAPIENS
experimentX-ray (resolution=1.90, R-factor=0.195)
structural superfamilyRNA-binding domain, RBD;
sequence familyRNA recognition motif aka RRM, RBD, or;
redundant complexes3vaf_A 3vag_B 3vah_B 3vai_A 3vak_A 3val_D 3vam_A 4tu7_B 4tu8_B 4tu9_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  ----RC--NU------KUNUFC------PC--DC--KUFU----NUVU--------YUFUKUKULUQUAU       +---------------3vaj_B    
                                                                               ! 
  ------------------------------------DGICLGWGQGKT--LT--KGFGFGRG------PC   L --3               +4y0f_A    
                                                                               !           +---1 
  EGQGKGFA--DGVGMG----FGRTETKTAGVA--SG----------------------------------   L   +-----------2   +2up1_A    
                                                                                           ! 
  ------------------------------------TAFCSG--LAKATG--TGSGVGFA----RAECAC   L               +---5tkz_B    
                                                                             

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updated Tue Dec 19 08:20:28 2023