interface graph thumbnail
legend  pdf

structure nameANAC019 NAC DOMAIN IN COMPLEX WITH DNA
(NAC domain-containing protein 19)
referenceLo Leggio et al. Biochem.J. 444 395 2012
sourceArabidopsis thaliana
experimentX-ray (resolution=4.11, R-factor=0.269)
structural superfamilyNAC domain;
sequence familyNo apical meristem NAM protein;
multimeric complexes3swm_ABD 3swp_ABCD
redundant complexes3swm_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureNKTTYAPK

Estimated binding specificities ?

readout + contactlogo
# IC=4.046 IC/col=0.809 n_of_columns=5 specificity:   
A |   9   0  67  69   0
C |  69   0   9   9   0
G |   9  96   9   9  96
T |   9   0  11   9   0
scan!

home
updated Tue Dec 19 08:09:07 2023