3kmp_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF SMAD1-MH1/DNA COMPLEX
reference	Baburajendran et al. 'Nucleic 38 3477 2010
source	MUS MUSCULUS
experiment	X-ray (resolution=2.70, R-factor=?)
structural superfamily	SMAD MH1 domain;
reference complex	6fzs_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3kmp_A interface=66,68,73, ftspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalscpgqpsncvtiprsldgRlQvshrKglphviycrvwrwpdlqshhelkpleccefpfgskqkevcinpyhykrves > 3kmp_B interface=65,67,72, tspavkrllgwkqgdeeekwaekavdalvkklkkkkgameelekalscpgqpsncvtiprsldgRlQvshrKglphviycrvwrwpdlqshhelkpleccefpfgskqkevcinpyhykrves
interface signature	RQK/RQK

Estimated binding specificities ?

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# IC=7.964 IC/col=0.885 n_of_columns=9

specificity:

A |   0  15  29   0  96   5  59   0  82
C |   0  13  54   0   0   9  13  96   0
G |  96   9   9   0   0  82  13   0   4
T |   0  59   4  96   0   0  11   0  10

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updated Fri Dec 15 15:20:55 2023