structure name | CRYSTAL STRUCTURE OF MOUSE ELF3 C-TERMINAL DNA-BINDING DOMAIN IN COMPLEX WITH TYPE II TGF-BETA RECEPTOR PROMOTER DNA (ETS-related transcription factor Elf-3) |
reference | Babayeva et al. |
source | Mus musculus |
experiment | X-ray (resolution=2.20, R-factor=0.234) |
structural superfamily | "Winged helix" DNA-binding domain; |
sequence family | Etsdomain; |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | EKRARYR |
Estimated binding specificities ?
readout + contact |
A | 76 0 0 96 38 C | 1 0 0 0 19 G | 19 96 96 0 20 T | 0 0 0 0 19scan! |
Related DNA sequences reported in the literature ?
site | source | matches (E-value) |
---|---|---|
term: ELF3 | ||
AAGCAGGAAGTT | PubMed | 3jtg_A(4.96e-10) |
Dendrogram of similar interfaces ?
matrix format--KT--RG----RGYA------ L +-----------------------------3wts_C +-1 --------NT--CT--NGST-- L +-2 +-----------------------------1if1_B ! ! ------TT----CT--NGKG-- L +-3 +-----------------------------7rh2_B ! ! ----NAST--RGHT--STLT-- L +-4 +-----------------------------7cby_C ! ! ------TT----CT--NG---- L --5 +-----------------------------7oot_B ! RC------------------SG +-----------------------------7cow_T |
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updated Tue Dec 19 07:41:15 2023