interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF SHEWANELLA ONEIDENSIS NRTR COMPLEXED WITH A 27MER DNA
(MutTnudix family protein)
referenceHuang et al. Structure 17 939 2009
sourceShewanella oneidensis
experimentX-ray (resolution=2.90, R-factor=0.178)
structural superfamilyNudix;
sequence familyNUDIX domain;
multimeric complexes3gz6_AB
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureQKSRRRR

Estimated binding specificities ?

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# IC=8.431 IC/col=0.937 n_of_columns=9 specificity:   
A |  96   0  96   0  96  24  13  96  16
C |   0   0   0  96   0  24  13   0  13
G |   0  96   0   0   0  24  16   0  13
T |   0   0   0   0   0  24  54   0  54
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updated Tue Dec 19 07:22:24 2023