interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE ANALYSIS OF S. POMBE ATL IN COMPLEX WITH DNA
(Alkyltransferase-like protein 1)
referenceTainer et al. Nature 459 808 2009
sourceSchizosaccharomyces pombe
experimentX-ray (resolution=2.70, R-factor=0.231)
structural superfamilyMethylated DNA-protein cysteine methyltransferase, C-terminal domain;
sequence family6Omethylguanine DNA methyltransferase;
redundant complexes3gyh_X 4enj_A 4enk_A 4enm_A 4hdu_A 4hdv_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  --RCQC------                        +------3gx4_X    
                       +--------------3 
  --RGAC------         !              !  +---1t38_A    
                     +-5              +--2 
  --RGAC--LG--       ! !                 +---4wx9_A    
                     ! ! 
  ----------YG     --6 +---------------------3irr_C    
                     ! 
  ----------YG       !       +---------------1sfu_A    
                     +-------4 
  ------RG--YG               !             +-1qbj_C    
                             +-------------1 
  RC----QG----                             +-4qlc_U    
                   

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updated Tue Dec 19 07:22:10 2023