| structure name | MUTM ENCOUNTERING AN INTRAHELICAL 8-OXOGUANINE (OXOG) LESION IN EC4- LOOP DELETION COMPLEX (DNA glycosylase) |
| reference | Verdine et al. Nature 462 762 2009 |
| source | Geobacillus stearothermophilus |
| experiment | X-ray (resolution=1.62, R-factor=0.189) |
| structural superfamily | N-terminal domain of MutM-like DNA repair proteins;S13-like H2TH domain;Glucocorticoid receptor-like DNA-binding domain; |
| sequence family | FormamidopyrimidineDNA glycosylase N; FormamidopyrimidineDNA glycosylase H2; Zinc finger found in FPG and IleRS; |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence |
No structural evidence for specific binding to DNA (<4 informative columns)
Related DNA sequences reported in the literature ?
| site | source | matches (E-value) |
|---|---|---|
| term: MUTM | ||
| CTGGC | PubMed | 3go8_A(1.34e-04) |
Dendrogram of similar interfaces ?
matrix format--RGMG----RCFC--RG L +3u6p_A +-1 --RA------RGFT--RA +-2 +3gpu_A ! ! --RTMT----RCFA--RT +-----------3 +6fl1_A ! ! RT--MG----RCFC--RT L --6 +-6tc9_A ! --QALGYA--------RG ! +---------1k3x_A +---5 ----MG--ITRCFGHGRG L ! +------5itu_A +--4 ----MG--ITRCFG--RG +------6lwd_G |
home
updated Tue Dec 19 07:21:40 2023