3cro_R : 3D-footprint complex

structure name	THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
reference	Harrison et al.
experiment	X-ray (resolution=2.50, R-factor=0.220)
structural superfamily	lambda repressor-like DNA-binding domains;
sequence family	Helixturnhelix;
multimeric complexes	3cro_LR
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 3cro_R interface=19,20,29,30,31,32,34,35,41,45, mqtlserlkkrrialkmtQTelatkagvKQQSiQLieagvTkrpRflfeiamalncdpvwlqyg
interface signature	QTKQQSQLTR

Estimated binding specificities ?

contact

# IC=3.520 IC/col=0.880 n_of_columns=4

specificity:

A |   0  19   0  38
C |   0   1   0  19
G |   0  76   0  19
T |  96   0  96  20

scan!

Dendrogram of similar interfaces ?

matrix format

  
  --QT--STNTVTAT--STQTRTETTT--   L                      +2r1j_L    
                                                  +-----1 
  ----RTTT--AT----STRG----TT--   L                !     +6chv_D    
                                         +--------3 
  RT--------RG------NTET--RTYA   L       !        ! +---7f9h_B    
                                         !        +-2 
  ----AT--QAAT--SA------------       +---5          +---4z5h_A    
                                     !   ! 
  ----ATATTTPTTT--NT----------   L   !   !    +---------6fix_D    
                                   --6   +----4 
  ----STKCQAAT--SA------------   L   !        +---------3dnv_B    
                                     ! 
  ------SGKGSCQT--STRG--------   L   +------------------6w1a_A

home
updated Tue Dec 19 07:14:16 2023