interface graph thumbnail
legend  pdf

structure nameCRYSTAL STRUCTURE OF THE SRA DOMAIN OF MOUSE NP95 IN COMPLEX WITH HEMI-METHYLATED CPG DNA
(E3 ubiquitin-protein ligase UHRF1)
referenceShirakawa et al. Nature 455 818 2008
sourceMus musculus
experimentX-ray (resolution=1.60, R-factor=0.156)
structural superfamilyPUA domain-like;
sequence familyYDG/SRA domain;
multimeric complexes6m2v_AB
redundant complexes2zo2 2zke 3f8i 2zkf 3f8j 6m2v 2zo0
reference complex3fde_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  AGCCHGVGLCNCKCRG--                +--2zkd_B    
                           +--------2 
  ------VG------RGIG       !        ! +4pw7_E    
                         --3        +-1 
  ------VCLCNC--RGTG       !          +3clz_B    
                           ! 
  ----SAQG----------       +-----------6a5n_A    
                         

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updated Mon Dec 18 07:24:14 2023