structure name | CRYSTAL STRUCTURE OF SOXR IN COMPLEX WITH DNA (Redox-sensitive transcriptional activator soxR) |
reference | Kobayashi et al. Proc.Natl.Acad.Sci.Usa 105 4121 2008 |
source | Escherichia coli |
experiment | X-ray (resolution=2.80, R-factor=0.243) |
structural superfamily | Putative DNA-binding domain; |
sequence family | MerR, DNA binding; MerR family regulatory protein; |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | SF |
Estimated binding specificities ?
contact |
A | 52 0 19 19 C | 14 96 19 20 G | 14 0 20 19 T | 16 0 38 38scan! |
Dendrogram of similar interfaces ?
matrix formatRART------ +------4r24_B ! KGQGRT---- L ! +5i44_I --4 +-1 KCRT----YC ! +-----2 +1r8e_A ! ! ! RGHTHC--YG L +-3 +1r8d_B ! EARTYARTYG L +------6jgx_B |
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updated Tue Dec 19 07:08:18 2023