interface graph thumbnail
legend  pdf

structure namePOLYMERASE DOMAIN FROM MYCOBACTERIUM TUBERCULOSIS LIGASE D IN COMPLEX WITH DNA
(Putative DNA ligase-like protein)
referenceBrissett et al. Science 318 456 2007
sourceMycobacterium tuberculosis H37Rv
experimentX-ray (resolution=2.40, R-factor=0.229)
structural superfamilyPLP-dependent transferases;
sequence familyEukaryotic and archaeal DNA primase sma;
multimeric complexes3pky_AB
redundant complexes3pky_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence

No structural evidence for specific binding to DNA (<4 informative columns)


Dendrogram of similar interfaces ?

matrix format
  
  RGPGFCFAKARG--------------------------------MA----------             +----------------------2r9l_A    
                                                                   +---1 
  --------------TAFCAG----RC------FA------------DARAEGACRC   L   +-2   +----------------------6dg0_A    
                                                                 ! ! 
  --------------RT----NGEG--EGNGPG--NAKTHA--RA------------   L --3 +--------------------------4ht4_A    
                                                                 ! 
  ------------TC--------------------------RG--------------   L   +---------------------------3qfq_B    
                                                               

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updated Tue Dec 19 06:56:34 2023