2ih2_D : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF THE ADENINE-SPECIFIC DNA METHYLTRANSFERASE M.TAQI COMPLEXED WITH THE COFACTOR ANALOG AETA AND A 10 BP DNA CONTAINING 5-METHYLPYRIMIDIN-2(1H)-ONE AT THE TARGET BASE PARTNER POSITION (Modification methylase TaqI)
reference	Scheidig et al.
source	Thermus aquaticus
experiment	X-ray (resolution=1.61, R-factor=0.162)
structural superfamily	S-adenosyl-L-methionine-dependent methyltransferases;DNA methylase specificity domain;
redundant complexes	1g38_A 2ibs_D 2ibt_A 2ih4_D 2ih5_A 2jg3_D 2np6_A 2np7_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 2ih2_D interface=1,85,88,96,97,119,176,179,180,181,248,251,252,253,254,276,303,315,316,333,334,373,374, VetppevvdfmvslaeaprggrvlepacahgpflrafreahgtayrfvgveidpkaldlppwaegiladfllwepgeafdlilgNppYgivgeasKYpihvfkavkdlykkafstwkgKynlygaflekavrllkpggvlvfvvpatwlvledfallreflaregktsvyylgevFpqKKVsavvirfqksgkglslwdtqesesgftpilwaeyphwegeiirfeteetrkleisgmplgdlfhirFaaRSPEfkkhpavrkepgpglvpvltgRnlkpgwvdyeknhsglwmpkerakelRdfyatphlvvaHTkgtrvvaawderaypwREefhllpkegvrldpsslvqwlnseamqkhvrtlyrdfvPHltlrmlerlpvrreygfht
interface signature	VNYKYKFKKVFRSPERRHTREPH

readout + contact

# IC=6.407 IC/col=0.915 n_of_columns=7

A |  72   0  96   8   0  72   8
C |   8  96   0  80   0   8  72
G |   8   0   0   0  96   8   8
T |   8   0   0   8   0   8   8

matrix format

home
updated Tue Dec 19 06:35:50 2023