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legend  pdf

structure nameNIKR-OPERATOR DNA COMPLEX
referenceSchreiter et al. Proc.Natl.Acad.Sci.Usa 103 13676 2006
sourceEscherichia coli
experimentX-ray (resolution=3.10, R-factor=?)
structural superfamilyACT-like;Ribbon-helix-helix;
reference complex2hzv_A
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureRTT/RTT/RTT/RTT

Estimated binding specificities ?

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# IC=13.376 IC/col=0.478 n_of_columns=28 specificity:   
A |   0   0  21   0   0  96  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0  86  55  96   0
C |   0   0  23   0   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0  96   0  10   0  96
G |  96   0  10   0  96   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24   0   0  10  21   0   0
T |   0  96  42  96   0   0  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  24  96   0   0  10   0   0
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updated Fri Dec 15 12:02:03 2023