1zg1_AB : 3D-footprint complex

structure name	NARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE
reference	Kaczor-Grzeskowiak et al.
source	Escherichia coli
experiment	X-ray (resolution=2.30, R-factor=?)
structural superfamily	C-terminal effector domain of the bipartite response regulators;
reference complex	1je8_F
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1zg1_A interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif > 1zg1_B interface=35,36,38,39,40,42, rdvnqltprerdilkliaqglpnkmiarrlditeSTvKVHvKhmlkkmklksrveaavwvhqerif
interface signature	STKVHK/STKVHK

Estimated binding specificities ?

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# IC=11.498 IC/col=0.719 n_of_columns=16

specificity:

A |   0  79   0   0  24  81  11  24  24  75  24  24  96   0   0  96
C |   0   7  86  96  24   5   5  24  24   5  24  24   0   0   0   0
G |   0   5   5   0  24   5  13  24  24  11  24  24   0  96   0   0
T |  96   5   5   0  24   5  67  24  24   5  24  24   0   0  96   0

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updated Fri Dec 15 11:30:02 2023