1z9c_CD : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF OHRR BOUND TO THE OHRA PROMOTER: STRUCTURE OF MARR FAMILY PROTEIN WITH OPERATOR DNA
reference	Fuangthong et al. Mol.Cell 20 131 2005
source	Bacillus subtilis
experiment	X-ray (resolution=2.64, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1z9c_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1z9c_C interface=61,62,64,66,71,88, hmklenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTpmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlh > 1z9c_D interface=60,61,63,65,66,70,87, mklenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTPmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlh
interface signature	DSTTRR/DSTTPRR

Estimated binding specificities ?

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# IC=11.599 IC/col=0.610 n_of_columns=19

specificity:

A |   1   1  24  57  96   2   0  24  70  24  11   0  24   0  24   0  24  24  94
C |   0   1  24  17   0  11  23  24   0  24  15   0  24   4  24   2  24  24   1
G |   1   0  24  22   0   3   3  24   0  24  19   0  24   0  24   0  24  24   1
T |  94  94  24   0   0  80  70  24  26  24  51  96  24  92  24  94  24  24   0

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updated Fri Dec 15 11:29:23 2023