1z9c_AB : 3D-footprint complex

structure name	CRYSTAL STRUCTURE OF OHRR BOUND TO THE OHRA PROMOTER: STRUCTURE OF MARR FAMILY PROTEIN WITH OPERATOR DNA
reference	Fuangthong et al. Mol.Cell 20 131 2005
source	Bacillus subtilis
experiment	X-ray (resolution=2.64, R-factor=?)
structural superfamily	"Winged helix" DNA-binding domain;
reference complex	1z9c_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1z9c_A interface=59,60,62,64,69,86, klenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlylDSgTlTpmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlhq > 1z9c_B interface=61,63,65,70,87, mklenqlsfllyassremtkqykplldklnitypqylallllwehetltvkkmgeqlyldSgTlTpmlkRmeqqglitrkrseedeRsvlisltedgallkekavdipgtilglskqsgedlkqlksalytlletlh
interface signature	DSTTRR/STTRR

Estimated binding specificities ?

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# IC=14.326 IC/col=0.716 n_of_columns=20

specificity:

A |   0   0  24  89  89   2  24   4  10  24   6  89  24  24  89   0   7  24  96  96
C |   0   0  24   3   3   2  24   4   2  24   4   3  24  24   2   0  20  24   0   0
G |   0   0  24   2   2   3  24  84  11  24   4   2  24  24   2   0  11  24   0   0
T |  96  96  24   2   2  89  24   4  73  24  82   2  24  24   3  96  58  24   0   0

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updated Fri Dec 15 11:29:07 2023