1srs_AB : 3D-footprint complex

structure name	SERUM RESPONSE FACTOR (SRF) CORE COMPLEXED WITH SPECIFIC SRE DNA
reference	Pellegrini et al. Nature 376 490 1995
source	Homo sapiens
experiment	X-ray (resolution=3.20, R-factor=?)
structural superfamily	SRF-like;
reference complex	1hbx_A
links to other resources	NAKB PDIdb DNAproDB
protein sequence	> 1srs_A interface=1,4,24, TrgRvkikmefidnklrryttfsKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtclnspd > 1srs_B interface=1,4,20,23,24, TrgRvkikmefidnklrryTtfSKrktgimkkayelstltgtqvlllvasetghvytfatrklqpmitsetgkaliqtcl
interface signature	TRK/TRTSK

Estimated binding specificities ?

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# IC=9.129 IC/col=0.913 n_of_columns=10

specificity:

A |   0   0   2  88  45  14   0  92   3   3
C |  96  96  10   5  17  10   0   3   3   0
G |   0   0   3   3  17  12   0   1  90  24
T |   0   0  81   0  17  60  96   0   0  69

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updated Fri Dec 15 11:02:10 2023