structure name | CRYSTAL STRUCTURE OF REPLICATION INITIATOR PROTEIN REPE54 OF MINI-F PLASMID COMPLEXED WITH AN ITERON DNA (PROTEIN REPLICATION INITIATION PROTEIN) |
reference | Matsunaga et al. |
source | Escherichia coli |
experiment | X-ray (resolution=2.60, R-factor=?) |
structural superfamily | "Winged helix" DNA-binding domain; |
sequence family | Initiator Replication protein; |
multimeric complexes | 2z9o_AB |
redundant complexes | 2z9o |
reference complex | 7rva_C |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | SAESKRRSYRPDRRR |
Estimated binding specificities ?
readout + contact |
A | 0 0 0 0 96 0 80 24 24 24 24 10 0 24 65 10 5 C | 0 0 0 0 0 96 5 24 24 24 24 10 96 24 10 11 90 G | 0 96 0 96 0 0 5 24 24 24 24 70 0 24 10 15 0 T | 96 0 96 0 0 0 6 24 24 24 24 6 0 24 11 60 1scan! |
Dendrogram of similar interfaces ?
matrix format------SGAAECSAKGRG----RG--STYGRTPGDCRGRGRC L +--------------------1rep_C +-----2 ----TT--PTTCSTNT--------RT---------------- L ! ! +-----------------4lln_I --3 +--1 LTETTTRAECRCRCQC-------------------------- L ! +-----------------3n97_A ! ----------------RGHTST-------------------- L +--------------------------6akp_C |
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updated Mon Dec 18 05:57:26 2023