structure name | CRYSTAL STRUCTURE OF THE INTEIN HOMING ENDONUCLEASE PI-SCEI BOUND TO ITS SUBSTRATE DNA (CA2+ FREE) (ENDONUCLEASE PI-SCEI) |
reference | Quiocho et al. |
source | Saccharomyces cerevisiae |
experiment | X-ray (resolution=3.20, R-factor=?) |
structural superfamily | Hedgehog/intein Hint domain;Homing endonucleases; |
sequence family | Hom_endassociated Hint; Homing endonuclease; |
redundant complexes | 1lws_A |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | QRLRIKYEESSSHKRYKNEKDNTHY |
Estimated binding specificities ?
readout + contact |
A | 1 0 91 61 0 24 28 24 24 0 6 24 24 3 1 0 0 1 0 83 24 24 0 24 96 0 92 C | 26 96 3 0 0 24 62 24 24 96 5 24 24 78 1 96 96 1 96 3 24 24 0 24 0 96 0 G | 0 0 1 1 0 24 5 24 24 0 11 24 24 12 1 0 0 71 0 9 24 24 0 24 0 0 1 T | 69 0 1 34 96 24 1 24 24 0 74 24 24 3 93 0 0 23 0 1 24 24 96 24 0 0 3scan! |
Dendrogram of similar interfaces ?
matrix formatQGRALARGITKAYTETECSTSTSTHTKGRG------YA----KG------NTECKCDGNCTTHG--YT L +---------------------1lwt_A +------2 ------------------------------QGEC--------QC------------------------ L ! ! +-------------3c0w_A --3 +-------1 --------------------------------TGQG--RGRGWC--------------------VC-- L ! +-------------2vs7_A ! --------------------------------------------KGCGFT------------------ L +----------------------------2bop_A |
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updated Tue Dec 19 05:53:44 2023