interface graph thumbnail
legend  pdf

structure nameTWO-COMPONENT RESPONSE REGULATOR NARL/DNA COMPLEX: DNA BENDING FOUND IN A HIGH AFFINITY SITE
referenceKaczor-Grzeskowiak et al. Nat.Struct.Biol. 9 771 2002
sourceEscherichia coli
experimentX-ray (resolution=2.12, R-factor=?)
structural superfamilyC-terminal effector domain of the bipartite response regulators;
reference complex1je8_F
links to other resourcesNAKB PDBSum PDIdb DNAproDB
protein sequence
interface signatureSTKVHK/STKVHK

Estimated binding specificities ?

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# IC=11.823 IC/col=0.739 n_of_columns=16 specificity:   
A |   0  57   0   0  24  96  24  24  24  24   0   9   0   0   9  96
C |   0   9  96  96  24   0  24  24  24  24   0  11   0   0   9   0
G |   0  21   0   0  24   0  24  24  24  24   0  67  96  96  11   0
T |  96   9   0   0  24   0  24  24  24  24  96   9   0   0  67   0
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updated Fri Dec 15 09:16:12 2023