structure name | 3D SOLUTION NMR STRUCTURE OF THE M9I MUTANT OF THE HMG-BOX DOMAIN OF THE HUMAN MALE SEX DETERMINING FACTOR SRY COMPLEXED TO DNA (SEX-DETERMINING REGION Y PROTEIN) |
source | HOMO SAPIENS |
experiment | NMR |
structural superfamily | HMG-box; |
sequence family | HMG high mobility group box; |
redundant complexes | 1j46 |
reference complex | 1hry_A |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | RNFIRNSSYPR |
Estimated binding specificities ?
contact |
A | 76 6 76 78 89 6 C | 6 76 6 6 7 89 G | 8 6 8 6 0 1 T | 6 8 6 6 0 0scan! |
Related DNA sequences reported in the literature ?
site | source | matches (E-value) |
---|---|---|
term: SRY | ||
AACAAT | PubMed | 1j47_A(1.13e-03), 1j46_A(3.39e-03) |
AACAAAG | PubMed | 1j47_A(6.45e-06), 1j46_A(5.20e-05) |
TCAAAG | PubMed | 1j47_A(1.14e-03), 1j46_A(3.39e-03) |
ACAAT | PubMed | 1j47_A(3.57e-04), 1j46_A(1.01e-03) |
ATTGTT | PubMed | 1j47_A(1.13e-03), 1j46_A(3.39e-03) |
CTTTG | PubMed | 1j47_A(3.63e-04), 1j46_A(1.01e-03) |
GAACAAT | PubMed | 1j47_A(3.39e-03), 1j46_A(1.05e-02) |
NACAAT | PubMed | 1j47_A(1.13e-03), 1j46_A(3.39e-03) |
Dendrogram of similar interfaces ?
matrix formathome
updated Mon Dec 18 05:12:57 2023