structure name | CRYSTAL STRUCTURE OF NAEI COMPLEXED WITH 17MER DNA (TYPE II RESTRICTION ENZYME NAEI) |
reference | Colandene et al. Nat.Struct.Biol. 8 665 2001 |
source | LECHEVALIERIA AEROCOLONIGENES |
experiment | X-ray (resolution=2.40, R-factor=?) |
structural superfamily | Restriction endonuclease-like; |
sequence family | Restriction endonuclease NaeI; |
links to other resources | NAKB PDIdb DNAproDB |
protein sequence | |
interface signature | KTTMNRDKR |
Estimated binding specificities ?
readout + contact |
A | 8 8 2 0 33 2 C | 73 72 0 2 51 3 G | 7 8 93 94 6 89 T | 8 8 1 0 6 2scan! |
Related DNA sequences reported in the literature ?
site | source | matches (E-value) |
---|---|---|
term: NAEI | ||
GCCGGC | PubMed | 1iaw_B(1.12e-03), 1iaw_AB(3.67e-09) |
GGGTGCCGGCAGGG | PubMed | 1iaw_AB(9.20e-05) |
TTTCGCCGGCGTTT | PubMed | 1iaw_B(2.61e-04), 1iaw_AB(1.90e-11) |
CGGCCG | PubMed | 1iaw_B(1.12e-03), 1iaw_AB(6.35e-03) |
CCCGGG | PubMed | 1iaw_AB(6.35e-03) |
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updated Mon Dec 18 05:11:14 2023