| structure name | PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX (PROTEIN HOMEOBOX PROTEIN HOX-B1) |
| reference | Batchelor et al. 'Cell(Cambridge,Mass.)' 96 587 1999 |
| source | HOMO SAPIENS |
| experiment | X-ray (resolution=2.35, R-factor=0.243) |
| structural superfamily | Homeodomain-like; |
| sequence family | Homeobox domain; |
| multimeric complexes | 1b72_AB |
| links to other resources | NAKB  PDIdb DNAproDB |
| protein sequence | |
| interface signature | RIQNM |
Estimated binding specificities ?
| contact |  |
A | 9 96 69 24 11 C | 9 0 9 24 9 G | 69 0 9 24 67 T | 9 0 9 24 9scan! |
Dendrogram of similar interfaces ?
matrix formatRC--RT----------------ITQCNAACRG-- L +--------------6a8r_A +---10 ----RA----------------ITQTNAMG---- L ! ! +5zjt_E +-----13 +--------------1 --RCRT----------------NT--NAITRG-- L ! ! +5zjt_B ! ! --------TGRGSTATEA--ST------------ L ! +-------------------6xg8_A ! ----RT--------------KTIAQCNA----RT L ! +1ig7_A ! +-------5 --------------YTVC--KGDCKC-------- L ! ! +2qhb_A ! +---7 ----RT----------------IAKGNA------ L ! ! ! +2hdd_A ! ! +-------3 ----RAYA--------------IAQCNAYCKG-- L -15 +--8 +5flv_I ! ! ! ----RT----------------NT--NA--RG-- L ! ! ! +1b8i_B ! +-9 +-----------4 ----------------------NCITNARGRG-- L ! ! ! +6fqq_E ! ! ! ----------------------IA--NA------ ! +-11 ! +4qtr_D ! ! ! +--------------2 ----RT----------------NT--NAIARG-- L ! ! ! +1b72_B ! +--12 ! ----RA--------------KGSAQA-------- L ! ! ! +---------------6j5b_C ! ! ! ----------------RTQT--ITQANAVTKTKT L +---14 +-----------------2ld5_A ! ----RT--------STVC--KGDCRG-------- L ! +--1w0t_A +------------------6 ------------------NTTCTA---------- L +--5zux_A |
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updated Tue Dec 19 05:26:10 2023