; matrix-quality -v 1 -m /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -matrix_format tab -seq db_sites /export/internal_use2/amedina/matrix_eval/data/Sites_FNA_R/PutA.fna -perm db_sites 0 -scanopt db_sites '-uth rank_pm 1' -seq allup-noorf /export/internal_use2/amedina/matrix_eval/data/sequences/allup/Escherichia_coli_K12_allup-noorf_min30_max500.fasta -perm allup-noorf 1 -roc_ref theor -img_format png,pdf -graph_option '-title1 PutA' -graph_option '-title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab' -graph_option '-xgstep1 5 -xgstep2 1' -graph_option '-ymin 1.0e-7 -ymax 1' -graph_option '-xmin -50 -xmax 30' -roc_option '-gstep1 0.1 -gstep2 0.05' -roc_option '-title1 PutA' -roc_option '-title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab' -2str -pseudo 1 -bgfile /export/space2/rsa-tools/data/genomes/Escherichia_coli_K12/oligo-frequencies/1nt_upstream-noorf_Escherichia_coli_K12-ovlp-1str.freq -th_prior /export/space2/rsa-tools/data/genomes/Escherichia_coli_K12/oligo-frequencies/1nt_upstream-noorf_Escherichia_coli_K12-ovlp-1str.freq -o /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality -graph_option '-colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab ' -roc_option '-colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab' ; Sequence sets (name, permutations, file); db_sites 0 /export/internal_use2/amedina/matrix_eval/data/Sites_FNA_R/PutA.fna ; allup-noorf 1 /export/internal_use2/amedina/matrix_eval/data/sequences/allup/Escherichia_coli_K12_allup-noorf_min30_max500.fasta ; LOO partial matrices ; 2010_03_11.202059 running matrix-scan ; Sequence type matrix_sites_loo ; 2010_03_11.202100 Computing score distribution ; Sequence type db_sites ; Sequence type db_sites ; Sequence file /export/internal_use2/amedina/matrix_eval/data/Sites_FNA_R/PutA.fna ; Type-specific options -uth rank_pm 1 ;Command: /export/space2/rsa-tools/perl-scripts/matrix-scan -v 1 -i /export/internal_use2/amedina/matrix_eval/data/Sites_FNA_R/PutA.fna -m /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -matrix_format tab -return sites -decimals 1 -2str -bgfile /export/space2/rsa-tools/data/genomes/Escherichia_coli_K12/oligo-frequencies/1nt_upstream-noorf_Escherichia_coli_K12-ovlp-1str.freq -uth rank_pm 1 | grep -v '^;' | grep -v '^#' | cut -f 8 | /export/space2/rsa-tools/perl-scripts/classfreq -v 1 -ci 0.1 -min -21.4 | cut -f 1,4,5,6,9 > /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_scan_db_sites_score_distrib.tab ; 2010_03_11.202101 Computing score distribution ; Sequence type allup-noorf ; Sequence type allup-noorf ; Sequence file /export/internal_use2/amedina/matrix_eval/data/sequences/allup/Escherichia_coli_K12_allup-noorf_min30_max500.fasta ;Command: /export/space2/rsa-tools/perl-scripts/matrix-scan -v 1 -i /export/internal_use2/amedina/matrix_eval/data/sequences/allup/Escherichia_coli_K12_allup-noorf_min30_max500.fasta -m /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -matrix_format tab -return sites -decimals 1 -2str -bgfile /export/space2/rsa-tools/data/genomes/Escherichia_coli_K12/oligo-frequencies/1nt_upstream-noorf_Escherichia_coli_K12-ovlp-1str.freq | grep -v '^;' | grep -v '^#' | cut -f 8 | /export/space2/rsa-tools/perl-scripts/classfreq -v 1 -ci 0.1 -min -21.4 | cut -f 1,4,5,6,9 > /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_scan_allup-noorf_score_distrib.tab ; 2010_03_11.202518 Computing score distribution ; Sequence type allup-noorf_perm_col_1 ; Sequence type allup-noorf_perm_col_1 ; Sequence file /export/internal_use2/amedina/matrix_eval/data/sequences/allup/Escherichia_coli_K12_allup-noorf_min30_max500.fasta ;Command: /export/space2/rsa-tools/perl-scripts/matrix-scan -v 1 -i /export/internal_use2/amedina/matrix_eval/data/sequences/allup/Escherichia_coli_K12_allup-noorf_min30_max500.fasta -m /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_matrix_perm_col_1.tab -matrix_format tab -return sites -decimals 1 -2str -bgfile /export/space2/rsa-tools/data/genomes/Escherichia_coli_K12/oligo-frequencies/1nt_upstream-noorf_Escherichia_coli_K12-ovlp-1str.freq | grep -v '^;' | grep -v '^#' | cut -f 8 | /export/space2/rsa-tools/perl-scripts/classfreq -v 1 -ci 0.1 -min -21.4 | cut -f 1,4,5,6,9 > /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_scan_allup-noorf_perm_col_1_score_distrib.tab ; ; XYgraph command /export/space2/rsa-tools/perl-scripts/XYgraph -i /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa.tab -format png -lines -pointsize 0 -title1 PutA -title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -xgstep1 5 -xgstep2 1 -ymin 1.0e-7 -ymax 1 -xmin -50 -xmax 30 -colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab -xcol 1 -ycol 2,3,4,5,6 -ymin 0 -ymax 1 -xgstep1 5 -xgstep2 1 -ygstep1 0.1 -ygstep2 0.02 -gp 'set size ratio 0.5' -title1 'PutA_2rbf_AB' -legend -xsize 800 -ysize 400 -xleg1 'matrix score' -yleg1 'Frequency (inverse cumulative) ' -o /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa.png ; ; XYgraph command /export/space2/rsa-tools/perl-scripts/XYgraph -i /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa.tab -format png -lines -pointsize 0 -title1 PutA -title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -xgstep1 5 -xgstep2 1 -ymin 1.0e-7 -ymax 1 -xmin -50 -xmax 30 -colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab -xcol 1 -ycol 2,3,4,5,6 -xgstep1 5 -xgstep2 1 -ymax 1 -ylog 10 -gp 'set size ratio 0.5' -title1 'PutA_2rbf_AB' -legend -xsize 800 -ysize 400 -xleg1 'matrix score' -yleg1 'Frequency (inverse cumulative) ' -o /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa_logy.png ; ; XYgraph command /export/space2/rsa-tools/perl-scripts/XYgraph -xlog 10 -i /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa.tab -format png -lines -pointsize 0 -title1 PutA -title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -xgstep1 5 -xgstep2 1 -ymin 1.0e-7 -ymax 1 -xmin -50 -xmax 30 -colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab -xcol 2 -ycol 2,3,4,5,6 -ygstep1 0.1 -ygstep2 0.02 -ymax 1 -xmax 1 -title1 'PutA_2rbf_AB' -legend -xsize 400 -ysize 400 -xleg1 'matrix score' -yleg1 'Frequency (inverse cumulative) ' -gstep1 0.1 -gstep2 0.05 -title1 PutA -title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab -o /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa_roc_xlog.png -xleg1 'FPR (Reference = theor)' -yleg1 'Site Sn + other distributions' ; ; XYgraph command /export/space2/rsa-tools/perl-scripts/XYgraph -i /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_theorical_score_distrib_compa.tab -format png -lines -pointsize 0 -title1 PutA -title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -xgstep1 5 -xgstep2 1 -ymin 1.0e-7 -ymax 1 -xmin -50 -xmax 30 -colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab -xcol 1 -ycol 2 -ymin 0 -ymax 1 -gp 'set size ratio 0.5' -title1 'PutA_2rbf_AB' -legend -xsize 400 -ysize 400 -xleg1 'matrix score' -yleg1 'Frequency (inverse cumulative) ' -o /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_theorical_score_distrib_compa.png ; ; XYgraph command /export/space2/rsa-tools/perl-scripts/XYgraph -i /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_theorical_score_distrib_compa.tab -format png -lines -pointsize 0 -title1 PutA -title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -xgstep1 5 -xgstep2 1 -ymin 1.0e-7 -ymax 1 -xmin -50 -xmax 30 -colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab -xcol 1 -ycol 2 -ymax 1 -ylog 10 -gp 'set size ratio 0.5' -title1 'PutA_2rbf_AB' -legend -xsize 400 -ysize 400 -xleg1 'matrix score' -yleg1 'Frequency (inverse cumulative) ' -o /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_theorical_score_distrib_compa_logy.png ; ; XYgraph command /export/space2/rsa-tools/perl-scripts/XYgraph -i /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa.tab -format pdf -lines -pointsize 0 -title1 PutA -title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -xgstep1 5 -xgstep2 1 -ymin 1.0e-7 -ymax 1 -xmin -50 -xmax 30 -colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab -xcol 1 -ycol 2,3,4,5,6 -ymin 0 -ymax 1 -xgstep1 5 -xgstep2 1 -ygstep1 0.1 -ygstep2 0.02 -gp 'set size ratio 0.5' -title1 'PutA_2rbf_AB' -legend -xsize 800 -ysize 400 -xleg1 'matrix score' -yleg1 'Frequency (inverse cumulative) ' -o /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa.pdf ; ; XYgraph command /export/space2/rsa-tools/perl-scripts/XYgraph -i /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa.tab -format pdf -lines -pointsize 0 -title1 PutA -title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -xgstep1 5 -xgstep2 1 -ymin 1.0e-7 -ymax 1 -xmin -50 -xmax 30 -colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab -xcol 1 -ycol 2,3,4,5,6 -xgstep1 5 -xgstep2 1 -ymax 1 -ylog 10 -gp 'set size ratio 0.5' -title1 'PutA_2rbf_AB' -legend -xsize 800 -ysize 400 -xleg1 'matrix score' -yleg1 'Frequency (inverse cumulative) ' -o /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa_logy.pdf ; ; XYgraph command /export/space2/rsa-tools/perl-scripts/XYgraph -xlog 10 -i /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa.tab -format pdf -lines -pointsize 0 -title1 PutA -title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -xgstep1 5 -xgstep2 1 -ymin 1.0e-7 -ymax 1 -xmin -50 -xmax 30 -colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab -xcol 2 -ycol 2,3,4,5,6 -ygstep1 0.1 -ygstep2 0.02 -ymax 1 -xmax 1 -title1 'PutA_2rbf_AB' -legend -xsize 400 -ysize 400 -xleg1 'matrix score' -yleg1 'Frequency (inverse cumulative) ' -gstep1 0.1 -gstep2 0.05 -title1 PutA -title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab -o /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa_roc_xlog.pdf -xleg1 'FPR (Reference = theor)' -yleg1 'Site Sn + other distributions' ; ; XYgraph command /export/space2/rsa-tools/perl-scripts/XYgraph -i /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_theorical_score_distrib_compa.tab -format pdf -lines -pointsize 0 -title1 PutA -title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -xgstep1 5 -xgstep2 1 -ymin 1.0e-7 -ymax 1 -xmin -50 -xmax 30 -colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab -xcol 1 -ycol 2 -ymin 0 -ymax 1 -gp 'set size ratio 0.5' -title1 'PutA_2rbf_AB' -legend -xsize 400 -ysize 400 -xleg1 'matrix score' -yleg1 'Frequency (inverse cumulative) ' -o /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_theorical_score_distrib_compa.pdf ; ; XYgraph command /export/space2/rsa-tools/perl-scripts/XYgraph -i /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_theorical_score_distrib_compa.tab -format pdf -lines -pointsize 0 -title1 PutA -title2 /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab -xgstep1 5 -xgstep2 1 -ymin 1.0e-7 -ymax 1 -xmin -50 -xmax 30 -colors /export/internal_use2/amedina/matrix_eval/data/quality_colors.tab -xcol 1 -ycol 2 -ymax 1 -ylog 10 -gp 'set size ratio 0.5' -title1 'PutA_2rbf_AB' -legend -xsize 400 -ysize 400 -xleg1 'matrix score' -yleg1 'Frequency (inverse cumulative) ' -o /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_theorical_score_distrib_compa_logy.pdf ; Input files ; bg_file /export/space2/rsa-tools/data/genomes/Escherichia_coli_K12/oligo-frequencies/1nt_upstream-noorf_Escherichia_coli_K12-ovlp-1str.freq ; matrix /export/internal_use2/amedina/matrix_eval/data/Matrices_contact/PutA/PutA_2rbf_AB.tab ; Sequence files ; allup-noorf /export/internal_use2/amedina/matrix_eval/data/sequences/allup/Escherichia_coli_K12_allup-noorf_min30_max500.fasta ; db_sites /export/internal_use2/amedina/matrix_eval/data/Sites_FNA_R/PutA.fna ; Output files ; allup-noorf /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_scan_allup-noorf_score_distrib.tab ; allup-noorf_matrix_perm_col_all /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_allup-noorf_matrix_perm_col_all_1.tab ; allup-noorf_perm_col_1 /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_scan_allup-noorf_perm_col_1_score_distrib.tab ; db_sites /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_scan_db_sites_score_distrib.tab ; db_sites_matrix_perm_col_all /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_db_sites_matrix_perm_col_all_0.tab ; distrib_compa /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_score_distrib_compa ; index /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_index.html ; log /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_log.txt ; matrix_info /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_matrix_info.txt ; matrix_logo PutA_2rbf_AB_m1_logo ; matrix_perm_col_1 /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_matrix_perm_col_1.tab ; matrix_rc /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_rc ; matrix_rc_logo PutA_2rbf_AB_m1_logo_rc ; matrix_sites_loo /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_matrix_sites_loo.tab ; matrix_sites_loo_distrib /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_scan_matrix_sites_loo_score_distrib.tab ; matrix_tab /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_matrix.tab ; prefix /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality ; th_distrib_compa /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_theorical_score_distrib_compa ; theoretical_distrib /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_theor_score_distrib.tab ; Directories ; output /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab ; Matrix permutations per sequence type ; db_sites 0 ; allup-noorf 1 ; Distributions ; 1 /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_scan_matrix_sites_loo_score_distrib.tab ; 2 /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_scan_db_sites_score_distrib.tab ; 3 /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_scan_allup-noorf_score_distrib.tab ; 4 /export/internal_use2/amedina/matrix_eval/results/contact/matrix_quality_200100311/PutA/PutA_2rbf_AB.tab/PutA_2rbf_AB.tab_quality_scan_allup-noorf_perm_col_1_score_distrib.tab ; Job started 2010_03_11.202051 ; Job done 2010_03_11.202957